BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017A01SP1|AL427094
(580 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1721 1123 0.0
>3x_Contig1721
Length = 17834
Score = 1123 bits (564), Expect = 0.0
Identities = 573/578 (99%)
Strand = Plus / Minus
Query: 1 tcattccaaaggaagtttataacaaattctttgctgagttgagacaaaggcacagaaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5826 tcattccaaaggaagtttataacaaattctttgctgagttgagacaaaggcacagaaaag 5767
Query: 61 cgatgacaaagagaaacaaagaggataaagacaagattacctaccaagaacgacttgagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5766 cgatgacaaagagaaacaaagaggataaagacaagattacctaccaagaacgacttgagc 5707
Query: 121 magaacacctagaattctaccaacgtgaaaacaataaccagtatccacctatgcaaaagc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5706 aagaacacctagaattctaccaacgtgaaaacaataaccagtatccacctatgcaaaagc 5647
Query: 181 cagccactcagtttccatcaaagaagaccagtaccgttaaccatccttcaaatattgcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5646 cagccactcagtttccatcaaagaagaccagtaccgttaaccatccttcaaatattgcat 5587
Query: 241 tgtcagcatcgccagatgacgaagcttcatcgaaaccaaaaatgaaggaacgtactgtat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5586 tgtcagcatcgccagatgacgaagcttcatcgaaaccaaaaatgaaggaacgtactgtat 5527
Query: 301 ggggaacacaaattaccgttacagaccaaaatgtcatcgaagaggacctagagttcgaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5526 ggggaacacaaattaccgttacagaccaaaatgtcatcgaagaggacctagagttcgaga 5467
Query: 361 aaatgctacttgaagcttcacaatcgaagaaaggtcgttcaaagaaaaagggtaaaacac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5466 aaatgctacttgaagcttcacaatcgaagaaaggtcgttcaaagaaaaagggtaaaacac 5407
Query: 421 tccttctgagttacaactcaactagaacattataagacaatataaagcagacactcttaa 480
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5406 tccttctgagtaacaactcaactagaacattataagacaatataaagcagacactcttaa 5347
Query: 481 tacctaaktacagatcattttatatagatgcataamagagtgacacaggatcactaacga 540
||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 5346 tacctaattacagatcattttatatagatgcataaaagagtgacacaggatcactaacga 5287
Query: 541 acctgggttgtatcgtatatcccatcatcaggggcaca 578
|||||| |||||||||||||||||||||||||||||||
Sbjct: 5286 acctggtttgtatcgtatatcccatcatcaggggcaca 5249
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4351
Number of Sequences: 1807
Number of extensions: 4351
Number of successful extensions: 111
Number of sequences better than 1.0e-20: 1
length of query: 580
length of database: 10,358,551
effective HSP length: 16
effective length of query: 564
effective length of database: 10,329,639
effective search space: 5825916396
effective search space used: 5825916396
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)